Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
EIF3FO00303 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 AC012313.1-201ENST00000593393 3059 ntBASIC17.53■□□□□ 0.4
EIF3FO00303 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.53■□□□□ 0.4
EIF3FO00303 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 MTCL1P1-201ENST00000446207 792 ntBASIC17.53■□□□□ 0.4
EIF3FO00303 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.53■□□□□ 0.4
EIF3FO00303 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
EIF3FO00303 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EIF3FO00303 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.53■□□□□ 0.4
EIF3FO00303 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EIF3FO00303 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
EIF3FO00303 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EIF3FO00303 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
EIF3FO00303 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
EIF3FO00303 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
EIF3FO00303 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
EIF3FO00303 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.52■□□□□ 0.4
EIF3FO00303 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EIF3FO00303 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EIF3FO00303 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EIF3FO00303 AL031133.1-201ENST00000406807 723 ntBASIC17.52■□□□□ 0.4
EIF3FO00303 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.52■□□□□ 0.4
EIF3FO00303 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EIF3FO00303 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EIF3FO00303 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.52■□□□□ 0.4
EIF3FO00303 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.52■□□□□ 0.4
EIF3FO00303 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
EIF3FO00303 AL590326.2-201ENST00000625139 305 ntBASIC17.52■□□□□ 0.4
EIF3FO00303 AL391005.1-201ENST00000623953 2435 ntBASIC17.52■□□□□ 0.4
EIF3FO00303 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EIF3FO00303 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EIF3FO00303 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
EIF3FO00303 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
EIF3FO00303 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EIF3FO00303 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.52■□□□□ 0.39
EIF3FO00303 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EIF3FO00303 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.51■□□□□ 0.39
EIF3FO00303 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
EIF3FO00303 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EIF3FO00303 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
EIF3FO00303 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.51■□□□□ 0.39
EIF3FO00303 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
EIF3FO00303 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.51■□□□□ 0.39
EIF3FO00303 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.51■□□□□ 0.39
EIF3FO00303 GUSBP12-201ENST00000513727 720 ntBASIC17.51■□□□□ 0.39
EIF3FO00303 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.51■□□□□ 0.39
EIF3FO00303 AC090616.6-201ENST00000582640 721 ntBASIC17.51■□□□□ 0.39
EIF3FO00303 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.51■□□□□ 0.39
EIF3FO00303 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.51■□□□□ 0.39
EIF3FO00303 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
EIF3FO00303 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.51■□□□□ 0.39
EIF3FO00303 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
EIF3FO00303 AC099398.1-201ENST00000567919 2776 ntBASIC17.51■□□□□ 0.39
EIF3FO00303 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EIF3FO00303 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.5■□□□□ 0.39
EIF3FO00303 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.5■□□□□ 0.39
EIF3FO00303 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.5■□□□□ 0.39
EIF3FO00303 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 AC097374.2-201ENST00000618617 1306 ntBASIC17.5■□□□□ 0.39
EIF3FO00303 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
EIF3FO00303 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.5■□□□□ 0.39
EIF3FO00303 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
EIF3FO00303 AL513477.1-201ENST00000602865 2407 ntBASIC17.5■□□□□ 0.39
EIF3FO00303 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
EIF3FO00303 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.5■□□□□ 0.39
EIF3FO00303 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EIF3FO00303 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms