Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NPIPB4C9JG80 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 SIRPAP1-201ENST00000448467 1770 ntBASIC15.84■□□□□ 0.13
NPIPB4C9JG80 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB4C9JG80 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.83■□□□□ 0.13
NPIPB4C9JG80 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 GUSBP12-201ENST00000513727 720 ntBASIC15.83■□□□□ 0.12
NPIPB4C9JG80 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB4C9JG80 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 RN7SL606P-201ENST00000472779 293 ntBASIC15.82■□□□□ 0.12
NPIPB4C9JG80 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPB4C9JG80 AC090616.6-201ENST00000582640 721 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms