Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 AL512353.2-201ENST00000448759 1962 ntBASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.28■□□□□ 0.84
SPDYE4A6NLX3 KRT8P45-201ENST00000414328 1447 ntBASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 AC012317.2-201ENST00000623305 2251 ntBASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 AC069148.1-201ENST00000608741 768 ntBASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPDYE4A6NLX3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPDYE4A6NLX3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.27■□□□□ 0.83
SPDYE4A6NLX3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.27■□□□□ 0.83
SPDYE4A6NLX3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SPDYE4A6NLX3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 TPM4P1-201ENST00000436100 807 ntBASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 AL157762.1-201ENST00000619612 415 ntBASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDYE4A6NLX3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 AL645608.8-201ENST00000606034 2086 ntBASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms