Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 FUT8-AS1-201ENST00000621019 1521 ntBASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 PRYP5-201ENST00000451909 266 ntBASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 BX276092.7-203ENST00000637198 1536 ntBASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC144AA2RUR9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 PC-208ENST00000529047 1607 ntTSL 3 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 AP000997.3-201ENST00000623333 2250 ntBASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 LBH-204ENST00000406087 559 ntTSL 4 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 RNA5SP415-201ENST00000517246 115 ntBASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 AC116407.2-201ENST00000613639 860 ntBASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC144AA2RUR9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 AC003669.1-201ENST00000334569 611 ntBASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 INIP-202ENST00000374236 874 ntTSL 2 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 AC073621.1-201ENST00000392730 636 ntBASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 AL020989.1-201ENST00000422979 469 ntBASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 AC006557.2-201ENST00000592985 1240 ntBASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CCDC144AA2RUR9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 AL356488.2-201ENST00000602755 427 ntBASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 EFTUD1P1-204ENST00000560401 1798 ntBASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
CCDC144AA2RUR9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC25.58■■□□□ 1.68
CCDC144AA2RUR9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CCDC144AA2RUR9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CCDC144AA2RUR9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CCDC144AA2RUR9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC25.58■■□□□ 1.68
CCDC144AA2RUR9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms