Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.41■□□□□ 0.86
SYCE3A1L190 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.41■□□□□ 0.86
SYCE3A1L190 FLJ38576-201ENST00000623820 2459 ntBASIC20.41■□□□□ 0.86
SYCE3A1L190 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.41■□□□□ 0.86
SYCE3A1L190 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.41■□□□□ 0.86
SYCE3A1L190 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.41■□□□□ 0.86
SYCE3A1L190 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SYCE3A1L190 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.41■□□□□ 0.86
SYCE3A1L190 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SYCE3A1L190 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SYCE3A1L190 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.41■□□□□ 0.86
SYCE3A1L190 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.41■□□□□ 0.86
SYCE3A1L190 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYCE3A1L190 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
SYCE3A1L190 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SYCE3A1L190 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SYCE3A1L190 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.4■□□□□ 0.86
SYCE3A1L190 B3GAT3P1-201ENST00000471720 806 ntBASIC20.4■□□□□ 0.86
SYCE3A1L190 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.4■□□□□ 0.86
SYCE3A1L190 DUTP2-201ENST00000519164 463 ntBASIC20.4■□□□□ 0.86
SYCE3A1L190 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.4■□□□□ 0.86
SYCE3A1L190 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SYCE3A1L190 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SYCE3A1L190 AC008741.2-201ENST00000612792 3115 ntBASIC20.4■□□□□ 0.86
SYCE3A1L190 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SYCE3A1L190 AL109923.1-201ENST00000618799 583 ntBASIC20.4■□□□□ 0.86
SYCE3A1L190 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.4■□□□□ 0.86
SYCE3A1L190 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
SYCE3A1L190 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.4■□□□□ 0.86
SYCE3A1L190 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.4■□□□□ 0.86
SYCE3A1L190 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYCE3A1L190 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.4■□□□□ 0.86
SYCE3A1L190 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.39■□□□□ 0.86
SYCE3A1L190 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SYCE3A1L190 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SYCE3A1L190 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SYCE3A1L190 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.39■□□□□ 0.86
SYCE3A1L190 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SYCE3A1L190 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.39■□□□□ 0.85
SYCE3A1L190 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SYCE3A1L190 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 AC110285.5-201ENST00000611501 352 ntBASIC20.39■□□□□ 0.85
SYCE3A1L190 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 AC060834.1-201ENST00000443027 2032 ntBASIC20.39■□□□□ 0.85
SYCE3A1L190 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYCE3A1L190 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.38■□□□□ 0.85
SYCE3A1L190 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SYCE3A1L190 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.38■□□□□ 0.85
SYCE3A1L190 AC133681.1-201ENST00000465482 601 ntBASIC20.38■□□□□ 0.85
SYCE3A1L190 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.38■□□□□ 0.85
SYCE3A1L190 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.38■□□□□ 0.85
SYCE3A1L190 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 MIR6786-201ENST00000616843 113 ntBASIC20.38■□□□□ 0.85
SYCE3A1L190 DOC2GP-204ENST00000639052 2548 ntBASIC20.38■□□□□ 0.85
SYCE3A1L190 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SYCE3A1L190 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.38■□□□□ 0.85
SYCE3A1L190 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SYCE3A1L190 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SYCE3A1L190 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SYCE3A1L190 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYCE3A1L190 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms