Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 AC009065.1-201ENST00000564055 1225 ntBASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 RARRES2P10-201ENST00000564312 460 ntBASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 AC110285.5-201ENST00000611501 352 ntBASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CR392000.1-201ENST00000624770 1228 ntBASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 AC016396.2-201ENST00000562575 1417 ntBASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV3S1A0A5B6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.77■□□□□ 0.27
TCRBV3S1A0A5B6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
TCRBV3S1A0A5B6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TCRBV3S1A0A5B6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV3S1A0A5B6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.77■□□□□ 0.27
TCRBV3S1A0A5B6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 AL391005.1-201ENST00000623953 2435 ntBASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 MESTP1-201ENST00000404287 994 ntBASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 AC008894.3-201ENST00000624324 3103 ntBASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV3S1A0A5B6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 AC116353.5-201ENST00000638148 1699 ntBASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms