Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 COX5BP2-201ENST00000392354 334 ntBASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC005104.2-201ENST00000427818 678 ntBASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 Z69720.1-201ENST00000601483 472 ntBASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-4A0A0C4DH59 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 LINC00265-3P-201ENST00000447588 903 ntBASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 KRT17P6-201ENST00000453795 1220 ntBASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC092119.3-201ENST00000612618 583 ntBASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 LINC01451-201ENST00000623792 534 ntBASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 AL355312.1-201ENST00000407115 2176 ntBASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-4A0A0C4DH59 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC133963.1-201ENST00000504166 1679 ntBASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-4A0A0C4DH59 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms