Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
IGKV1D-43A0A0B4J1Z2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LTB4R2-202ENST00000528054 3092 ntBASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC009154.2-201ENST00000621177 724 ntBASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC139713.2-201ENST00000641328 2723 ntBASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.82■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC068472.1-201ENST00000474589 881 ntBASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC112698.1-201ENST00000510299 916 ntBASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 REXO1L11P-201ENST00000620964 1927 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms