Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC132938.6-201ENST00000623828 1655 ntBASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC103564.2-201ENST00000432853 1299 ntBASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 AD001527.2-201ENST00000622994 785 ntBASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC187A0A096LP49 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 AL355385.1-201ENST00000606123 409 ntBASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC187A0A096LP49 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 ANO7L1-203ENST00000602586 1720 ntBASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 AC073621.1-201ENST00000392730 636 ntBASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 SPDYE21P-201ENST00000413323 827 ntBASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 HMGN1P19-201ENST00000436976 333 ntBASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms