Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 KRT18P55-202ENST00000578578 1546 ntBASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3AQ9Y6K1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3AQ9Y6K1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AL354751.1-201ENST00000412768 1863 ntBASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 KRT16P4-201ENST00000453883 522 ntBASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 CLEC4GP1-201ENST00000596555 870 ntBASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AL121772.3-201ENST00000610840 674 ntBASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DNMT3AQ9Y6K1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DNMT3AQ9Y6K1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNMT3AQ9Y6K1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNMT3AQ9Y6K1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms