Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 AC005521.1-201ENST00000393351 872 ntBASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 AC024563.2-201ENST00000603282 481 ntBASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 AC139887.4-201ENST00000607877 719 ntBASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 AC022898.2-201ENST00000616822 1312 ntBASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA11Q9Y5H2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 AC132938.6-201ENST00000623828 1655 ntBASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 AL136038.4-201ENST00000603606 1261 ntBASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 AL391807.1-203ENST00000604392 2365 ntBASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA11Q9Y5H2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDHGA11Q9Y5H2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 FAM8A6P-201ENST00000407496 1135 ntBASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms