Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 SDHAP2-201ENST00000455183 2001 ntBASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 AC008687.5-201ENST00000593746 558 ntBASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB3Q9Y5G1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 AC012317.2-201ENST00000623305 2251 ntBASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 AC009947.2-201ENST00000444014 672 ntBASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 AC010240.3-201ENST00000607688 395 ntBASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 AL096828.2-201ENST00000567259 1965 ntBASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB3Q9Y5G1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 AC092647.4-201ENST00000457211 535 ntBASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms