Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 AC093010.1-201ENST00000473625 1624 ntBASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 HCG11-201ENST00000411553 5696 ntBASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 PRYP5-201ENST00000451909 266 ntBASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 RNA5SP416-201ENST00000516838 111 ntBASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB7Q9Y5E2 AC004817.3-201ENST00000602957 2129 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 KRT8P47-201ENST00000604727 1398 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC138932.1-201ENST00000534164 6830 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 UPF3AP3-201ENST00000420996 769 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC040169.1-201ENST00000565382 521 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC006557.2-201ENST00000592985 1240 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AL691403.2-201ENST00000618460 490 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC073592.4-201ENST00000623827 446 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AC005593.1-201ENST00000624894 515 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 PGM5P2-202ENST00000637225 1043 ntBASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB7Q9Y5E2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 COX5BP2-201ENST00000392354 334 ntBASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AC007967.2-201ENST00000432613 625 ntBASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 DUTP2-201ENST00000519164 463 ntBASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 MIR3687-2-201ENST00000577708 61 ntBASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 MIR3687-1-201ENST00000614492 61 ntBASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB7Q9Y5E2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms