Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB9Q9Y5E1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 AL590627.1-203ENST00000421194 1026 ntBASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 AC064862.7-201ENST00000604520 867 ntBASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 AL353801.3-201ENST00000609898 542 ntBASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB9Q9Y5E1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 GUSBP12-201ENST00000513727 720 ntBASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 AC099336.1-202ENST00000602961 463 ntBASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 BX640515.1-201ENST00000617215 977 ntBASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB9Q9Y5E1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 KRT18P13-201ENST00000400056 1290 ntBASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 MRPL3P1-201ENST00000400109 1033 ntBASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 AL354751.1-201ENST00000412768 1863 ntBASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms