Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 AC079781.3-201ENST00000449110 356 ntBASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 TOB2P1-201ENST00000469761 992 ntBASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 FOSL1P1-201ENST00000511041 816 ntBASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 AC091304.2-201ENST00000564639 760 ntBASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 AC104692.2-201ENST00000603054 253 ntBASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 SDHAP2-201ENST00000455183 2001 ntBASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 MIR149-201ENST00000384879 89 ntBASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 AL121772.3-201ENST00000610840 674 ntBASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 ESPNP-201ENST00000270691 2015 ntBASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC3AQ9Y2H6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 AC135776.1-201ENST00000319817 2481 ntBASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC3AQ9Y2H6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC3AQ9Y2H6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.33■□□□□ 0.52
FNDC3AQ9Y2H6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
FNDC3AQ9Y2H6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC3AQ9Y2H6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.33■□□□□ 0.52
FNDC3AQ9Y2H6 AL022342.1-201ENST00000400363 863 ntBASIC18.33■□□□□ 0.52
FNDC3AQ9Y2H6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.33■□□□□ 0.52
FNDC3AQ9Y2H6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms