Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AC092473.1-201ENST00000441098 221 ntBASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AC009154.2-201ENST00000621177 724 ntBASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AC006116.8-202ENST00000587620 1550 ntBASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS9D1Q9Y2B5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 AC006011.2-201ENST00000621313 1158 ntBASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS9D1Q9Y2B5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 HBZP1-201ENST00000354915 429 ntBASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 MIR662-201ENST00000384847 95 ntBASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 TSPY12P-201ENST00000421279 868 ntBASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 AP003733.1-201ENST00000491725 852 ntBASIC17.85■□□□□ 0.45
VPS9D1Q9Y2B5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms