Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 AC009947.2-201ENST00000444014 672 ntBASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 SNORA78-201ENST00000459373 127 ntBASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 DUTP2-201ENST00000519164 463 ntBASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2BQ9UQN3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 TSPY14P-201ENST00000303979 915 ntBASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2BQ9UQN3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CHMP2BQ9UQN3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP2BQ9UQN3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP2BQ9UQN3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP2BQ9UQN3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms