Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
CDK11AQ9UQ88 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 AC211486.1-202ENST00000416371 468 ntBASIC27.57■■■□□ 2
CDK11AQ9UQ88 HMGN1P19-201ENST00000436976 333 ntBASIC27.57■■■□□ 2
CDK11AQ9UQ88 KRT18P2-201ENST00000447938 1258 ntBASIC27.57■■■□□ 2
CDK11AQ9UQ88 DNAJB3-202ENST00000449667 1266 ntBASIC27.57■■■□□ 2
CDK11AQ9UQ88 AC211476.1-201ENST00000503899 468 ntBASIC27.57■■■□□ 2
CDK11AQ9UQ88 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 AL355385.1-201ENST00000606123 409 ntBASIC27.57■■■□□ 2
CDK11AQ9UQ88 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDK11AQ9UQ88 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC27.57■■■□□ 2
CDK11AQ9UQ88 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC27.56■■■□□ 2
CDK11AQ9UQ88 AC002310.6-201ENST00000624451 1377 ntBASIC27.56■■■□□ 2
CDK11AQ9UQ88 AL049757.1-201ENST00000616842 1596 ntBASIC27.56■■■□□ 2
CDK11AQ9UQ88 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDK11AQ9UQ88 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC27.55■■■□□ 2
CDK11AQ9UQ88 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDK11AQ9UQ88 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 ELK2BP-201ENST00000415014 1224 ntBASIC27.54■■■□□ 2
CDK11AQ9UQ88 NCF1C-201ENST00000438382 1427 ntBASIC27.54■■■□□ 2
CDK11AQ9UQ88 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 ADM-208ENST00000534464 1640 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 AC126763.1-201ENST00000552015 2118 ntBASIC27.54■■■□□ 2
CDK11AQ9UQ88 AC027796.2-201ENST00000575326 344 ntBASIC27.54■■■□□ 2
CDK11AQ9UQ88 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC27.54■■■□□ 2
CDK11AQ9UQ88 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDK11AQ9UQ88 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 AC132938.5-201ENST00000624980 1813 ntBASIC27.53■■■□□ 2
CDK11AQ9UQ88 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 CRYGEP-201ENST00000412192 528 ntBASIC27.53■■■□□ 2
CDK11AQ9UQ88 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 YBX1P5-201ENST00000509441 847 ntBASIC27.53■■■□□ 2
CDK11AQ9UQ88 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 AC005829.1-201ENST00000570002 483 ntBASIC27.53■■■□□ 2
CDK11AQ9UQ88 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.53■■■□□ 2
CDK11AQ9UQ88 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
CDK11AQ9UQ88 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms