Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 AP005901.3-202ENST00000581653 237 ntBASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 AC005336.2-201ENST00000593183 939 ntBASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 AC116407.2-201ENST00000613639 860 ntBASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 AC233702.3-201ENST00000578656 1387 ntBASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 AC012317.2-201ENST00000623305 2251 ntBASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 TOB2P1-201ENST00000469761 992 ntBASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 AC092119.3-201ENST00000612618 583 ntBASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PCDHA4Q9UN74 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 AC096633.1-201ENST00000422446 749 ntBASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA4Q9UN74 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
PCDHA4Q9UN74 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.45■□□□□ 0.87
PCDHA4Q9UN74 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 DDX43P3-201ENST00000441064 443 ntBASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 LINC00265-3P-201ENST00000447588 903 ntBASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 VENTXP7-201ENST00000475503 772 ntBASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms