Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.11■□□□□ 0.81
PUF60Q9UHX1 KRT8P3-201ENST00000519669 1449 ntBASIC20.1■□□□□ 0.81
PUF60Q9UHX1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 AC073592.3-201ENST00000625118 1834 ntBASIC20.1■□□□□ 0.81
PUF60Q9UHX1 PKD1P1-201ENST00000458669 6805 ntBASIC20.1■□□□□ 0.81
PUF60Q9UHX1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PUF60Q9UHX1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 AL162741.1-201ENST00000565563 1558 ntBASIC20.09■□□□□ 0.81
PUF60Q9UHX1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 NUS1P1-201ENST00000446295 882 ntBASIC20.09■□□□□ 0.81
PUF60Q9UHX1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 SEC1P-202ENST00000473944 940 ntBASIC20.09■□□□□ 0.81
PUF60Q9UHX1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 MIR3180-1-201ENST00000580374 94 ntBASIC20.09■□□□□ 0.81
PUF60Q9UHX1 MIR3180-3-201ENST00000584616 94 ntBASIC20.09■□□□□ 0.81
PUF60Q9UHX1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PUF60Q9UHX1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.08■□□□□ 0.81
PUF60Q9UHX1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms