Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
HMG20BQ9P0W2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMG20BQ9P0W2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 LINC01711-201ENST00000598340 967 ntBASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 AL591684.3-201ENST00000605187 298 ntBASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 REXO1L6P-202ENST00000619970 1078 ntBASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.8■■□□□ 1.08
HMG20BQ9P0W2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 DUTP2-201ENST00000519164 463 ntBASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 AF238378.1-201ENST00000526806 358 ntBASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 REXO1L9P-201ENST00000604264 2108 ntBASIC21.79■■□□□ 1.08
HMG20BQ9P0W2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms