Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AF228730.7-201ENST00000641842 219 ntBASIC18.51■□□□□ 0.55
VPS45Q9NRW7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 AC099343.3-201ENST00000605834 2503 ntBASIC18.51■□□□□ 0.55
VPS45Q9NRW7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VPS45Q9NRW7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 AC233702.3-201ENST00000578656 1387 ntBASIC18.5■□□□□ 0.55
VPS45Q9NRW7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS45Q9NRW7 LINC00167-201ENST00000530583 1419 ntBASIC18.49■□□□□ 0.55
VPS45Q9NRW7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 LINC01126-201ENST00000623515 1646 ntBASIC18.49■□□□□ 0.55
VPS45Q9NRW7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 MIR574-201ENST00000385209 96 ntBASIC18.49■□□□□ 0.55
VPS45Q9NRW7 TSPY12P-201ENST00000421279 868 ntBASIC18.49■□□□□ 0.55
VPS45Q9NRW7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 AC005332.3-201ENST00000589904 676 ntBASIC18.49■□□□□ 0.55
VPS45Q9NRW7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS45Q9NRW7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 AL096828.2-201ENST00000567259 1965 ntBASIC18.48■□□□□ 0.55
VPS45Q9NRW7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 SAPCD2P3-201ENST00000455031 850 ntBASIC18.48■□□□□ 0.55
VPS45Q9NRW7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 AP003733.1-201ENST00000491725 852 ntBASIC18.48■□□□□ 0.55
VPS45Q9NRW7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 AP001005.1-201ENST00000571755 1248 ntBASIC18.48■□□□□ 0.55
VPS45Q9NRW7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS45Q9NRW7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms