Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEUROD4Q9HD90 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 LIN28AP1-201ENST00000429574 405 ntBASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 ATP5G1P1-201ENST00000448724 379 ntBASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 GCSHP2-201ENST00000560971 527 ntBASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 NTF6B-201ENST00000591913 560 ntBASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEUROD4Q9HD90 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 DUX4L26-201ENST00000489078 1255 ntBASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEUROD4Q9HD90 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEUROD4Q9HD90 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms