Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 LINC00602-201ENST00000629776 2065 ntBASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AC018695.7-201ENST00000624587 2492 ntBASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AC069152.1-201ENST00000438030 544 ntBASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 KRT18P41-201ENST00000518924 1277 ntBASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AL445675.2-201ENST00000620291 557 ntBASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 AC126755.1-201ENST00000525846 6405 ntBASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SND1-IT1Q9HBX3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms