Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 AC022211.2-201ENST00000585075 2527 ntBASIC22.03■■□□□ 1.12
UPF2Q9HAU5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 KRT18P23-201ENST00000435622 1283 ntBASIC22.03■■□□□ 1.12
UPF2Q9HAU5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 DGCR10-201ENST00000609839 495 ntBASIC22.03■■□□□ 1.12
UPF2Q9HAU5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 AC073648.6-201ENST00000641589 218 ntBASIC22.03■■□□□ 1.12
UPF2Q9HAU5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPF2Q9HAU5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 AL121761.2-201ENST00000598007 1648 ntBASIC22.02■■□□□ 1.12
UPF2Q9HAU5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 MESTP1-201ENST00000404287 994 ntBASIC22.02■■□□□ 1.12
UPF2Q9HAU5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
UPF2Q9HAU5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
UPF2Q9HAU5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 C1QBPP2-201ENST00000528754 825 ntBASIC22.01■■□□□ 1.11
UPF2Q9HAU5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
UPF2Q9HAU5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
UPF2Q9HAU5 NKILA-202ENST00000614771 2598 ntBASIC22■■□□□ 1.11
UPF2Q9HAU5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22■■□□□ 1.11
UPF2Q9HAU5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22■■□□□ 1.11
UPF2Q9HAU5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
UPF2Q9HAU5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
UPF2Q9HAU5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22■■□□□ 1.11
UPF2Q9HAU5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22■■□□□ 1.11
UPF2Q9HAU5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms