Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 AC136632.2-201ENST00000512891 861 ntBASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 DUTP2-201ENST00000519164 463 ntBASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 AC002347.1-201ENST00000569543 541 ntBASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 AC134684.3-201ENST00000641758 218 ntBASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 CROCCP3-202ENST00000420820 1947 ntBASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
TDRD3Q9H7E2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 PGM5P2-202ENST00000637225 1043 ntBASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TDRD3Q9H7E2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TDRD3Q9H7E2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TDRD3Q9H7E2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TDRD3Q9H7E2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.14■□□□□ 0.98
TDRD3Q9H7E2 AC022898.2-201ENST00000616822 1312 ntBASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 AC004967.1-201ENST00000453589 447 ntBASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.97
TDRD3Q9H7E2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 AC132938.5-201ENST00000624980 1813 ntBASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 AL589182.2-201ENST00000619332 1049 ntBASIC21.13■□□□□ 0.97
TDRD3Q9H7E2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms