Protein–RNA interactions for Protein: Q9C0H5

ARHGAP39, Rho GTPase-activating protein 39, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39Q9C0H5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGAP39Q9C0H5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 MRPL20P1-201ENST00000400819 433 ntBASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 RHOQP3-201ENST00000437982 621 ntBASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 ACTG1P14-201ENST00000446382 1122 ntBASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 AL353593.2-201ENST00000602529 1483 ntBASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGAP39Q9C0H5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 AL390955.2-201ENST00000603032 514 ntBASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGAP39Q9C0H5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
ARHGAP39Q9C0H5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.14■□□□□ 0.82
ARHGAP39Q9C0H5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AL049757.1-201ENST00000616842 1596 ntBASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AC069262.1-201ENST00000539058 672 ntBASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 AL805961.1-202ENST00000641562 540 ntBASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ARHGAP39Q9C0H5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 COX5BP2-201ENST00000392354 334 ntBASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 PTCHD3P3-201ENST00000403073 906 ntBASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AC093520.2-201ENST00000561830 333 ntBASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AF228730.6-201ENST00000641497 218 ntBASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AC084121.3-201ENST00000641716 218 ntBASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 AC105233.6-201ENST00000642093 218 ntBASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGAP39Q9C0H5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms