Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 BX664615.1-201ENST00000443558 458 ntBASIC16.54■□□□□ 0.24
TRIM2Q9C040 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 AC140113.3-201ENST00000605663 199 ntBASIC16.54■□□□□ 0.24
TRIM2Q9C040 AL031432.5-201ENST00000641059 760 ntBASIC16.54■□□□□ 0.24
TRIM2Q9C040 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM2Q9C040 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM2Q9C040 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 GCSHP2-201ENST00000560971 527 ntBASIC16.53■□□□□ 0.24
TRIM2Q9C040 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM2Q9C040 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM2Q9C040 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 CROCCP1-201ENST00000426910 5675 ntBASIC16.52■□□□□ 0.24
TRIM2Q9C040 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 AC006116.8-202ENST00000587620 1550 ntBASIC16.52■□□□□ 0.24
TRIM2Q9C040 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM2Q9C040 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM2Q9C040 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 AC132938.6-201ENST00000623828 1655 ntBASIC16.52■□□□□ 0.23
TRIM2Q9C040 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRIM2Q9C040 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM2Q9C040 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM2Q9C040 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM2Q9C040 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms