Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 KRT18P48-201ENST00000434763 852 ntBASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 IRX1P1-201ENST00000438849 1838 ntBASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 AC011676.5-201ENST00000624864 2660 ntBASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF4Q9BUZ4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 AC036111.1-201ENST00000533973 1582 ntBASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 KRT8P3-201ENST00000519669 1449 ntBASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 MCCD1P1-208ENST00000445732 328 ntBASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 RASA4DP-201ENST00000460726 1199 ntBASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 MIR3180-5-201ENST00000583743 153 ntBASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF4Q9BUZ4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 HBZP1-201ENST00000354915 429 ntBASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 HCG4P8-203ENST00000443049 980 ntBASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF4Q9BUZ4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms