Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHRDL1Q9BU40 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRDL1Q9BU40 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRDL1Q9BU40 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CHRDL1Q9BU40 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRDL1Q9BU40 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 AC093677.2-201ENST00000600169 1863 ntBASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 AL163051.1-201ENST00000569214 1512 ntBASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRDL1Q9BU40 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 FAM87A-204ENST00000613235 858 ntBASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRDL1Q9BU40 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 KRT8P7-201ENST00000533003 1432 ntBASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 AC112497.1-201ENST00000624824 639 ntBASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms