Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 ESPNP-201ENST00000270691 2015 ntBASIC20.82■□□□□ 0.92
SLF1Q9BQI6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 AC005332.8-201ENST00000622750 2735 ntBASIC20.82■□□□□ 0.92
SLF1Q9BQI6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF1Q9BQI6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 RBM17P3-201ENST00000417687 1192 ntBASIC20.81■□□□□ 0.92
SLF1Q9BQI6 KRT18P67-201ENST00000432816 1264 ntBASIC20.81■□□□□ 0.92
SLF1Q9BQI6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 AL773604.1-201ENST00000617417 272 ntBASIC20.81■□□□□ 0.92
SLF1Q9BQI6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 AL355877.3-201ENST00000622820 899 ntBASIC20.81■□□□□ 0.92
SLF1Q9BQI6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF1Q9BQI6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AC132938.6-201ENST00000623828 1655 ntBASIC20.8■□□□□ 0.92
SLF1Q9BQI6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AF186996.4-201ENST00000467186 377 ntBASIC20.8■□□□□ 0.92
SLF1Q9BQI6 RNA5SP419-201ENST00000515908 135 ntBASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AP001005.1-201ENST00000571755 1248 ntBASIC20.8■□□□□ 0.92
SLF1Q9BQI6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AP001269.4-201ENST00000609611 512 ntBASIC20.8■□□□□ 0.92
SLF1Q9BQI6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLF1Q9BQI6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms