Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 FP700111.2-201ENST00000619190 1892 ntBASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC027307.3-201ENST00000594262 1100 ntBASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC011467.2-201ENST00000598425 242 ntBASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC090340.1-201ENST00000620778 4980 ntBASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC098818.2-201ENST00000564925 2320 ntBASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC112907.3-201ENST00000577781 2400 ntBASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3BQ96NU0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 AC007225.1-201ENST00000566331 1836 ntBASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.08■□□□□ 0.33
CNTNAP3BQ96NU0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 FAM207CP-201ENST00000443486 507 ntBASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 ACTG1P14-201ENST00000446382 1122 ntBASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 AC067863.1-201ENST00000494933 530 ntBASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3BQ96NU0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms