Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 KRT18P3-201ENST00000451602 1288 ntBASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 RNA5SP415-201ENST00000517246 115 ntBASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 AC008735.5-201ENST00000623544 497 ntBASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A1Q96NT5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 GPX1P2-201ENST00000429271 606 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 MIR3687-2-201ENST00000577708 61 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AC010327.4-202ENST00000591484 748 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AC025062.2-201ENST00000605477 670 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AL139424.1-201ENST00000607572 797 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 MIR3687-1-201ENST00000614492 61 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AC099343.3-201ENST00000605834 2503 ntBASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC46A1Q96NT5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 AC112482.1-201ENST00000492080 688 ntBASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 AC040169.1-201ENST00000565382 521 ntBASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 AP001160.2-201ENST00000596071 487 ntBASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 AL139288.1-201ENST00000623748 933 ntBASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC46A1Q96NT5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
SLC46A1Q96NT5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC46A1Q96NT5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms