Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 HOXB1-202ENST00000577092 1414 ntBASIC18.32■□□□□ 0.52
CCDC97Q96F63 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.32■□□□□ 0.52
CCDC97Q96F63 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.32■□□□□ 0.52
CCDC97Q96F63 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC97Q96F63 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 DUSP5P1-201ENST00000441325 1139 ntBASIC18.31■□□□□ 0.52
CCDC97Q96F63 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 AC116407.4-201ENST00000623319 1061 ntBASIC18.31■□□□□ 0.52
CCDC97Q96F63 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC97Q96F63 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC97Q96F63 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 AL359075.1-203ENST00000462729 1002 ntBASIC18.3■□□□□ 0.52
CCDC97Q96F63 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 AC090164.3-201ENST00000610780 2143 ntBASIC18.3■□□□□ 0.52
CCDC97Q96F63 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC97Q96F63 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC97Q96F63 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms