Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 AC104819.1-201ENST00000504587 486 ntBASIC15.89■□□□□ 0.13
APH1AQ96BI3 AC112698.1-201ENST00000510299 916 ntBASIC15.89■□□□□ 0.13
APH1AQ96BI3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.89■□□□□ 0.13
APH1AQ96BI3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APH1AQ96BI3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.89■□□□□ 0.13
APH1AQ96BI3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 AC074051.2-201ENST00000565115 352 ntBASIC15.88■□□□□ 0.13
APH1AQ96BI3 AC012615.1-201ENST00000565797 1299 ntBASIC15.88■□□□□ 0.13
APH1AQ96BI3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.88■□□□□ 0.13
APH1AQ96BI3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APH1AQ96BI3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.87■□□□□ 0.13
APH1AQ96BI3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APH1AQ96BI3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms