Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.04■■□□□ 1.28
ZNF428Q96B54 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF428Q96B54 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF428Q96B54 AC006116.8-202ENST00000587620 1550 ntBASIC23.04■■□□□ 1.28
ZNF428Q96B54 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF428Q96B54 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZNF428Q96B54 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.04■■□□□ 1.28
ZNF428Q96B54 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF428Q96B54 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 KRT8P47-201ENST00000604727 1398 ntBASIC23.03■■□□□ 1.28
ZNF428Q96B54 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 DDX43P3-201ENST00000441064 443 ntBASIC23.03■■□□□ 1.28
ZNF428Q96B54 KRT17P6-201ENST00000453795 1220 ntBASIC23.03■■□□□ 1.28
ZNF428Q96B54 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.03■■□□□ 1.28
ZNF428Q96B54 AC097374.2-201ENST00000618617 1306 ntBASIC23.03■■□□□ 1.28
ZNF428Q96B54 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF428Q96B54 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 AC100803.2-201ENST00000562459 1963 ntBASIC23.02■■□□□ 1.28
ZNF428Q96B54 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 AC004870.1-201ENST00000315132 882 ntBASIC23.02■■□□□ 1.28
ZNF428Q96B54 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 IGHV3-47-201ENST00000425060 335 ntBASIC23.02■■□□□ 1.28
ZNF428Q96B54 FDX1P1-201ENST00000449115 551 ntBASIC23.02■■□□□ 1.28
ZNF428Q96B54 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 NSUN5P1-202ENST00000421140 1535 ntBASIC23.02■■□□□ 1.28
ZNF428Q96B54 NSUN5P2-203ENST00000457352 1529 ntBASIC23.02■■□□□ 1.28
ZNF428Q96B54 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ZNF428Q96B54 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF428Q96B54 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
ZNF428Q96B54 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 AC096633.1-201ENST00000422446 749 ntBASIC23.01■■□□□ 1.27
ZNF428Q96B54 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF428Q96B54 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ZNF428Q96B54 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ZNF428Q96B54 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms