Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 BICD1-207ENST00000551848 1962 ntBASIC16.09■□□□□ 0.17
CPNE4Q96A23 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 OR6D1P-202ENST00000641007 5290 ntBASIC16.09■□□□□ 0.17
CPNE4Q96A23 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 AL353801.3-201ENST00000609898 542 ntBASIC16.09■□□□□ 0.17
CPNE4Q96A23 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 PKD1P1-201ENST00000458669 6805 ntBASIC16.09■□□□□ 0.17
CPNE4Q96A23 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 REXO1L9P-201ENST00000604264 2108 ntBASIC16.09■□□□□ 0.17
CPNE4Q96A23 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE4Q96A23 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE4Q96A23 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CPNE4Q96A23 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.08■□□□□ 0.17
CPNE4Q96A23 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE4Q96A23 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 ABALON-201ENST00000629058 1903 ntBASIC16.08■□□□□ 0.16
CPNE4Q96A23 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 AC112698.1-201ENST00000510299 916 ntBASIC16.08■□□□□ 0.16
CPNE4Q96A23 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 AC012615.1-201ENST00000565797 1299 ntBASIC16.08■□□□□ 0.16
CPNE4Q96A23 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.08■□□□□ 0.16
CPNE4Q96A23 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms