Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 FDX1P1-201ENST00000449115 551 ntBASIC18.91■□□□□ 0.62
ATP2A3Q93084 EMBP1-201ENST00000458200 901 ntBASIC18.91■□□□□ 0.62
ATP2A3Q93084 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 AC138894.3-201ENST00000603787 634 ntBASIC18.91■□□□□ 0.62
ATP2A3Q93084 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 RN7SL606P-201ENST00000472779 293 ntBASIC18.9■□□□□ 0.62
ATP2A3Q93084 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 AC099336.1-202ENST00000602961 463 ntBASIC18.9■□□□□ 0.62
ATP2A3Q93084 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.9■□□□□ 0.62
ATP2A3Q93084 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A3Q93084 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A3Q93084 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP2A3Q93084 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP2A3Q93084 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 AC008687.5-201ENST00000593746 558 ntBASIC18.89■□□□□ 0.61
ATP2A3Q93084 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A3Q93084 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A3Q93084 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP2A3Q93084 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A3Q93084 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A3Q93084 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2A3Q93084 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A3Q93084 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A3Q93084 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP2A3Q93084 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A3Q93084 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms