Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AC139887.3-201ENST00000568585 713 ntBASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AC116407.3-201ENST00000623905 1129 ntBASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SIRPAP1-201ENST00000448467 1770 ntBASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PMPCAP1-201ENST00000508114 1576 ntBASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AC090164.3-201ENST00000610780 2143 ntBASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 COX5BP2-201ENST00000392354 334 ntBASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AC093909.1-201ENST00000504731 1122 ntBASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AC012640.2-201ENST00000561606 901 ntBASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AD001527.2-201ENST00000622994 785 ntBASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AL139288.1-201ENST00000623748 933 ntBASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF3Q8TEJ3 AC009113.1-201ENST00000570267 2443 ntBASIC21.2■□□□□ 0.99
SH3RF3Q8TEJ3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 AP000997.3-201ENST00000623333 2250 ntBASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 BX005266.1-201ENST00000473402 457 ntBASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 MTDHP4-201ENST00000600287 670 ntBASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF3Q8TEJ3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 AC004817.3-201ENST00000602957 2129 ntBASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 MIR574-201ENST00000385209 96 ntBASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms