Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTRT1Q8TDG2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
ACTRT1Q8TDG2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 SEC1P-202ENST00000473944 940 ntBASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 AL049637.2-201ENST00000641778 930 ntBASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 AC009949.1-201ENST00000623048 1830 ntBASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.69■□□□□ 0.58
ACTRT1Q8TDG2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 AC007663.1-201ENST00000438948 1240 ntBASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 AC026471.5-201ENST00000615068 467 ntBASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTRT1Q8TDG2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 ITM2C-210ENST00000620962 501 ntBASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTRT1Q8TDG2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 DDX43P3-201ENST00000441064 443 ntBASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 AC116562.4-202ENST00000641738 218 ntBASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTRT1Q8TDG2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms