Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD6Q8TD26 AC096633.1-201ENST00000422446 749 ntBASIC15.99■□□□□ 0.15
CHD6Q8TD26 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.99■□□□□ 0.15
CHD6Q8TD26 BNIP3P42-201ENST00000454982 569 ntBASIC15.99■□□□□ 0.15
CHD6Q8TD26 RN7SL589P-201ENST00000481268 310 ntBASIC15.99■□□□□ 0.15
CHD6Q8TD26 AC007541.1-201ENST00000570282 1469 ntBASIC15.99■□□□□ 0.15
CHD6Q8TD26 BNIP3P29-201ENST00000598302 571 ntBASIC15.99■□□□□ 0.15
CHD6Q8TD26 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD6Q8TD26 AC011447.5-201ENST00000616168 564 ntBASIC15.99■□□□□ 0.15
CHD6Q8TD26 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHD6Q8TD26 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.99■□□□□ 0.15
CHD6Q8TD26 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD6Q8TD26 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CHD6Q8TD26 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 AC112698.1-201ENST00000510299 916 ntBASIC15.97■□□□□ 0.15
CHD6Q8TD26 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 AC009477.1-201ENST00000452936 217 ntBASIC15.97■□□□□ 0.15
CHD6Q8TD26 MIR4722-201ENST00000578292 60 ntBASIC15.97■□□□□ 0.15
CHD6Q8TD26 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 AC133552.6-201ENST00000613406 534 ntBASIC15.97■□□□□ 0.15
CHD6Q8TD26 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHD6Q8TD26 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD6Q8TD26 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 KRT223P-202ENST00000449164 1292 ntBASIC15.96■□□□□ 0.15
CHD6Q8TD26 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 AC006538.1-201ENST00000567905 1585 ntBASIC15.96■□□□□ 0.15
CHD6Q8TD26 AKAP8P1-201ENST00000434743 1349 ntBASIC15.96■□□□□ 0.15
CHD6Q8TD26 UXT-AS1-201ENST00000590504 1525 ntBASIC15.96■□□□□ 0.15
CHD6Q8TD26 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 AC106872.11-201ENST00000605838 421 ntBASIC15.96■□□□□ 0.15
CHD6Q8TD26 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHD6Q8TD26 Z98044.1-201ENST00000632503 1764 ntBASIC15.96■□□□□ 0.15
CHD6Q8TD26 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD6Q8TD26 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHD6Q8TD26 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.96■□□□□ 0.14
CHD6Q8TD26 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.96■□□□□ 0.14
CHD6Q8TD26 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD6Q8TD26 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD6Q8TD26 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD6Q8TD26 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CHD6Q8TD26 AC241585.1-201ENST00000433527 519 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms