Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 Z83836.1-201ENST00000624605 1642 ntBASIC15.72■□□□□ 0.11
CPEB3Q8NE35 AL133373.2-201ENST00000623187 2828 ntBASIC15.72■□□□□ 0.11
CPEB3Q8NE35 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 AC005332.1-201ENST00000577698 1310 ntBASIC15.71■□□□□ 0.11
CPEB3Q8NE35 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 AL390719.2-201ENST00000606993 987 ntBASIC15.71■□□□□ 0.11
CPEB3Q8NE35 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.71■□□□□ 0.11
CPEB3Q8NE35 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPEB3Q8NE35 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 AC011498.5-201ENST00000592027 486 ntBASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.7■□□□□ 0.1
CPEB3Q8NE35 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms