Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 YBX2P1-201ENST00000394192 760 ntBASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 AC021087.4-201ENST00000563761 564 ntBASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 RPS2P1-201ENST00000434010 821 ntBASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 AC112482.1-201ENST00000492080 688 ntBASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 AC113404.2-201ENST00000507884 177 ntBASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 OR7E14P-202ENST00000530490 1290 ntBASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF248Q8NDW4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 RNA5SP416-201ENST00000516838 111 ntBASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AC005336.2-201ENST00000593183 939 ntBASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AP005117.1-201ENST00000584346 1413 ntBASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF248Q8NDW4 AC004408.2-201ENST00000623613 2777 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms