Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AC018445.3-201ENST00000624177 1945 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 KRT19P2-202ENST00000557173 1012 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 SPCS2P1-201ENST00000561636 679 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AL031432.2-201ENST00000566714 459 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AL928711.1-201ENST00000570165 459 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AC004790.2-201ENST00000623588 572 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AL096828.2-201ENST00000567259 1965 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 TSEN15P1-201ENST00000423257 515 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 OR7E47P-204ENST00000575924 449 ntBASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
COL27A1Q8IZC6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 AC009336.1-201ENST00000608941 1553 ntBASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 AC003669.1-201ENST00000334569 611 ntBASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 COX5BP2-201ENST00000392354 334 ntBASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL27A1Q8IZC6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 DDX43P3-201ENST00000441064 443 ntBASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL27A1Q8IZC6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms