Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC132008.2-207ENST00000454517 770 ntBASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 REXO1L6P-202ENST00000619970 1078 ntBASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 AC022898.2-201ENST00000616822 1312 ntBASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4BQ8IWT1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 REXO1L9P-201ENST00000604264 2108 ntBASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN4BQ8IWT1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms