Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK3Q8IV63 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK3Q8IV63 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VRK3Q8IV63 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VRK3Q8IV63 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK3Q8IV63 AP002414.4-201ENST00000589764 1148 ntBASIC17.52■□□□□ 0.4
VRK3Q8IV63 AC069148.1-201ENST00000608741 768 ntBASIC17.52■□□□□ 0.4
VRK3Q8IV63 NPAP1P7-201ENST00000613027 823 ntBASIC17.52■□□□□ 0.4
VRK3Q8IV63 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.52■□□□□ 0.4
VRK3Q8IV63 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.52■□□□□ 0.39
VRK3Q8IV63 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK3Q8IV63 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VRK3Q8IV63 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.39
VRK3Q8IV63 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK3Q8IV63 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VRK3Q8IV63 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
VRK3Q8IV63 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VRK3Q8IV63 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VRK3Q8IV63 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK3Q8IV63 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK3Q8IV63 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 KRT18P1-202ENST00000452408 1331 ntBASIC17.51■□□□□ 0.39
VRK3Q8IV63 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 MIR3180-1-201ENST00000580374 94 ntBASIC17.51■□□□□ 0.39
VRK3Q8IV63 AP005901.3-202ENST00000581653 237 ntBASIC17.51■□□□□ 0.39
VRK3Q8IV63 MIR3180-3-201ENST00000584616 94 ntBASIC17.51■□□□□ 0.39
VRK3Q8IV63 AL353801.3-201ENST00000609898 542 ntBASIC17.51■□□□□ 0.39
VRK3Q8IV63 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 AC093458.2-201ENST00000623150 629 ntBASIC17.51■□□□□ 0.39
VRK3Q8IV63 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK3Q8IV63 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
VRK3Q8IV63 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VRK3Q8IV63 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.5■□□□□ 0.39
VRK3Q8IV63 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms