Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 AL121761.2-201ENST00000598007 1648 ntBASIC22.36■■□□□ 1.17
COL23A1Q86Y22 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 GSAP-205ENST00000430584 600 ntTSL 5 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 DUX4L27-201ENST00000554796 1261 ntBASIC22.36■■□□□ 1.17
COL23A1Q86Y22 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 AC023141.13-201ENST00000604991 943 ntBASIC22.36■■□□□ 1.17
COL23A1Q86Y22 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 AC093484.2-201ENST00000580996 2166 ntBASIC22.35■■□□□ 1.17
COL23A1Q86Y22 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 FAM86GP-201ENST00000448322 971 ntBASIC22.35■■□□□ 1.17
COL23A1Q86Y22 SLBP-205ENST00000488267 987 ntTSL 2 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 AC007064.4-201ENST00000637740 555 ntBASIC22.35■■□□□ 1.17
COL23A1Q86Y22 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 PKD1P6-201ENST00000343738 4769 ntBASIC22.35■■□□□ 1.17
COL23A1Q86Y22 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL23A1Q86Y22 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 REXO1L3P-201ENST00000622202 1288 ntBASIC22.34■■□□□ 1.17
COL23A1Q86Y22 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL23A1Q86Y22 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 SIGLEC30P-201ENST00000455569 941 ntBASIC22.33■■□□□ 1.17
COL23A1Q86Y22 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL23A1Q86Y22 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL23A1Q86Y22 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms