Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 RNF152P1-201ENST00000397754 604 ntBASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 MIR662-201ENST00000384847 95 ntBASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 FAM8A6P-201ENST00000407496 1135 ntBASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 HYMAI.1-201ENST00000620949 238 ntBASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 REXO1L11P-201ENST00000620964 1927 ntBASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD1LQ86WJ1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CHD1LQ86WJ1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 HBZP1-201ENST00000354915 429 ntBASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 IGHGP-201ENST00000390555 1178 ntBASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 AC009154.2-201ENST00000621177 724 ntBASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD1LQ86WJ1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 AC116407.2-201ENST00000613639 860 ntBASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms