Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 AC134043.2-201ENST00000624206 2238 ntBASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AC067852.2-201ENST00000590513 2313 ntBASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AC007663.1-201ENST00000438948 1240 ntBASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SNORA78-201ENST00000459373 127 ntBASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AL512604.3-201ENST00000569583 964 ntBASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AL513477.1-201ENST00000602865 2407 ntBASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL55Q7Z7F7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms