Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 CRYGEP-201ENST00000412192 528 ntBASIC15.02□□□□□ -0.01
CSMD2Q7Z408 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 FAM207CP-201ENST00000443486 507 ntBASIC15.02□□□□□ -0.01
CSMD2Q7Z408 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 AC025048.6-201ENST00000634326 1161 ntBASIC15.02□□□□□ -0.01
CSMD2Q7Z408 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 SIRPAP1-201ENST00000448467 1770 ntBASIC15.02□□□□□ -0.01
CSMD2Q7Z408 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.02□□□□□ -0.01
CSMD2Q7Z408 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 CRB3P1-201ENST00000449338 276 ntBASIC15.01□□□□□ -0.01
CSMD2Q7Z408 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 AL359881.2-201ENST00000602973 570 ntBASIC15.01□□□□□ -0.01
CSMD2Q7Z408 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CSMD2Q7Z408 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15□□□□□ -0.01
CSMD2Q7Z408 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15□□□□□ -0.01
CSMD2Q7Z408 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CSMD2Q7Z408 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CSMD2Q7Z408 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 AL049757.1-201ENST00000616842 1596 ntBASIC15□□□□□ -0.01
CSMD2Q7Z408 NME2P1-201ENST00000426182 414 ntBASIC15□□□□□ -0.01
CSMD2Q7Z408 AC055876.3-201ENST00000431496 288 ntBASIC15□□□□□ -0.01
CSMD2Q7Z408 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CSMD2Q7Z408 AC138649.4-201ENST00000612222 287 ntBASIC15□□□□□ -0.01
CSMD2Q7Z408 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15□□□□□ -0.01
CSMD2Q7Z408 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15□□□□□ -0.01
CSMD2Q7Z408 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15□□□□□ -0.01
CSMD2Q7Z408 ARSEP1-201ENST00000420443 635 ntBASIC15□□□□□ -0.01
CSMD2Q7Z408 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15□□□□□ -0.01
CSMD2Q7Z408 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CSMD2Q7Z408 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15□□□□□ -0.01
CSMD2Q7Z408 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD2Q7Z408 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CSMD2Q7Z408 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CSMD2Q7Z408 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 AL121761.2-201ENST00000598007 1648 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms